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Medical Image Computing and Imaging Informatics

Radiology Image Interpretation for Disease Identification

  • Cluster Activation Mapping with Application to Computed Tomography Scans of the Lung
    Sarah M. Ryan, Nichole E. Carlson, Harris Butler, Tasha E. Fingerlin, Lisa A. Maier, Fuyong Xing
    Journal of Medical Imaging, vol. 9, no. 2, 026001, 2022 [Codes]
  • Automated Liver Lesion Detection in 68Ga DOTATATE PET/CT Using a Deep Fully Convolutional Neural Network
    Jonathan Wehrend, Michael Silosky, Fuyong Xing, Bennett B. Chin
    EJNMMI Research, 11:98, 2021
  • Automated Liver Lesion Detection in 68Ga DOTATATE PET/CT: Preliminary Results Using a Deep Learning 3D Fully Convolutional Network
    Bennett Chin, Jonathan Wehrend, Michael Silosky, Christopher Halley, Remy Niman, Katie Moses, Ramesh Karki, Fuyong Xing
    Journal of Nuclear Medicine, 62 (supplement 1):1184, 2021
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    Object Detection in Digital Pathology and Microscopy Images

  • An Automatic Learning-Based Framework for Robust Nucleus Segmentation
    Fuyong Xing, Yuanpu Xie, Lin Yang
    IEEE Transactions on Medical Imaging, vol. 35, no. 2, pp. 550-566, 2016
  • Beyond Classification: Structured Regression for Robust Cell Detection Using Convolutional Neural Network
    Yuanpu Xie, Fuyong Xing, Xiangfei Kong, Hai Su, Lin Yang
    The 18th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), vol. 9351, pp. 358-365, 2015
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    High-thoughput Image Segmentation

  • Transfer Shape Modeling Towards High-throughput Microscopy Image Segmentation
    Fuyong Xing, Xiaoshuang Shi, Zizhao Zhang, Jinzheng Cai, Yuanpu Xie, Lin Yang
    The 19th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), vol. 9902, pp. 183-190, 2016
  • Robust Cell Detection and Segmentation in Histopathological Images Using Sparse Reconstruction and Stacked Denoising Autoencoders
    Hai Su, Fuyong Xing, Xiangfei Kong, Yuanpu Xie, Shaoting Zhang, Lin Yang
    The 18th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), vol. 9351, pp. 383-390, 2015
  • Robust Segmentation of Overlapping Cells in Histopathology Specimens Using Parallel Seed Detection and Repulsive Level Set
    Xin Qi, Fuyong Xing, David J. Foran, Lin Yang
    IEEE Transactions on Biomedical Engineering, vol. 59, no. 3, pp. 754-765, 2012


    • Scalable Image Mining

  • Parallel Content Based Sub-Image Retrieval Using Hierarchical Searching
    Lin Yang, Xin Qi, Fuyong Xing, Tahsin Kurc, Joel Saltz, David J. Foran
    Bioinformatics, vol. 30, no. 7, pp. 996-1002, 2014
  • Parallel Content-based Sub-image Retrieval
    Fuyong Xing, Xin Qi, David J. Foran, Tahsin Kurc, Joel Saltz, Lin Yang
    Data- and Compute-Intensive Clinical and Translational Imaging Applications Workshop in conjunction with the 15th International Conference on Medical Image Computing and Computer Assisted Intervention (DCICTIA-MICCAI), pp. 61-70, Nice, France, 2012


    • Biomarker Computation

  • Automatic Ki-67 Counting Using Robust Cell Detection and Online Dictionary Learning
    Fuyong Xing, Hai Su, Janna Neltner, Lin Yang
    IEEE Transactions on Biomedical Engineering, vol. 61, no. 3, pp. 859-870, 2014
  • An Integrated Framework for Automatic Ki-67 Scoring in Pancreatic Neuroendocrine Tumor
    Fuyong Xing, Hai Su, Lin Yang
    The 16th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), vol. 8149, pp. 436-443, 2013



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